Image Reconstruction at Scale: Challenges and Collaboration

 

Image Reconstruction at Scale: Challenges and Collaboration

4th of March 2025, 10:30 am

Downing College (Music Room), Cambridge, UK

 

This event brings together experts from astronomy, microscopy, and related fields to explore advances in large-scale image reconstruction. The primary goal is to foster collaboration within the ExCALIBUR network and the wider scientific community.

Key discussions will focus on designing solutions for large-scale image data reconstruction, tackling computational complexity and model uncertainty, and harnessing high-performance computing (HPC) to drive innovation.

Supported by the ExCALIBUR H&ES programme, this meeting aims to uncover new approaches and partnerships in large-scale image analysis.

 

Registration:

Please register by 21st of February 2025  https://forms.office.com/e/CWDnYmYjz9. A confirmation mail will follow.

 

Programme:

10:00-10:30

Welcome coffee

   

10:30-12:00

Bogdan Toader

MRC Laboratory of Molecular Biology

Image Reconstruction in Light-Sheet Microscopy: Spatially Varying Deconvolution and Mixed Noise

 

Hao Jia

PDN, University of Cambridge

Investigating calcium-mediated invasiveness of neuroendocrine cancers using multi-module fluorescence imaging and whole-cell patch clamp

 

Xiaoyu Deng

CAIC, University of Cambridge

TVL1 Optical flow for microscopy

 

Chris Richardson

IEEF, University of Cambridge

Converting voxel data to a mesh for finite element computation - an example

12:00-13:00

Lunch

   

13:00-14:30

Jason McEwen

UCL

Towards learned exascale computational imaging for radio astronomy

 

Edoardo Pasca

Science Technology Facilities Council

Computational challenges in Tomographic Imaging, how could we harvest super computers (open question)

 

Anita Karsa

University of Cambridge

When One Size Doesn’t Fit All: Tackling Bespoke Challenges in Biological Image Analysis

 

Simon Clifford

UIS, University of Cambridge

Using DASK to denoise very large images

14:30-15:00

Coffee break

   

15:00-16:00

Zakhar Shumaylov

DAMTP, University of Cambridge

Enabling Large-Scale Benchmarking of Learned Reconstruction Algorithms for Computed Tomography with LION and 2DeteCT

 

Paul Quinn

Ada Lovelace centre, Science Technology Facilities Council

Imaging at the STFC large national facilities - Diamond, ISIS and CLF

 

Chris Edsall

UIS, University of Cambridge

TBC

16:00-16:30

Unconferencing